Introductory NGS Course

Introductory course on NGS data analysis, including Galaxy, RNA-seq and ATAC-seq.

Instructor: Prof. Sumeet Pal Singh and Yura Song

Term: June

Location: Virtual

Overview

Introductory NGS course held virtually in June 2020, covering Galaxy, RNA-seq and ATAC-seq analysis.

This course was organised in memory of James Taylor (1979–2020), co-creator of Galaxy and an inspiration to the Open Science community.

Course materials

Sessions

The course included three sessions:

  1. Introduction to Galaxy and NGS Data Structures
  2. RNA-seq Analysis
  3. ATAC-seq Analysis

Schedule

Week Date Topic Materials
1 Jun 5, 2020 Introduction to Galaxy and NGS Data Structures

Introductory session covering Galaxy and basic NGS data structures.
2 Jun 18, 2020 RNA-seq Analysis

Practical session introducing RNA-seq data analysis.
3 Jun 25, 2020 ATAC-seq Analysis

Practical session introducing ATAC-seq data analysis.